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PDBsum entry 5k70

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 5k70 calculated with MOLE 2.0 PDB id
5k70
Pores calculated on whole structure Pores calculated excluding ligands

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8 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.23 2.47 25.9 -1.97 -0.67 19.6 87 3 2 2 4 1 0 0  
2 2.25 2.25 28.2 -2.15 -0.55 25.6 83 5 2 1 4 1 1 0  
3 2.25 2.25 38.6 -2.25 -0.62 23.5 86 5 2 2 4 1 1 0  
4 2.24 2.24 42.5 -1.40 -0.54 16.4 82 7 2 2 3 2 2 0  
5 1.27 1.28 54.4 -1.47 -0.49 16.1 91 4 2 7 9 0 1 0  
6 2.52 3.46 85.9 -1.35 -0.24 22.2 81 7 5 3 7 4 0 0  
7 1.61 2.22 90.9 -1.39 -0.33 20.9 83 9 5 5 4 4 0 0  
8 1.67 2.26 115.4 -1.62 -0.39 22.9 85 10 6 6 7 3 0 0  PO4 401 D
9 2.83 4.19 120.1 -1.31 -0.20 16.1 84 8 2 8 6 4 0 0  PO4 401 D
10 2.83 4.20 161.3 -1.24 -0.23 18.8 83 10 7 8 11 6 0 0  PO4 401 D
11 1.46 2.39 210.1 -1.08 -0.26 16.7 83 16 11 14 15 9 3 0  PO4 404 D
12 1.37 2.34 214.6 -0.94 -0.29 14.9 84 15 11 14 16 9 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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