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PDBsum entry 5ji2
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Pore analysis for: 5ji2 calculated with  MOLE 2.0
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PDB id
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5ji2
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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10 pores,
coloured by radius |
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8 pores,
coloured by radius
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8 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.81 |
3.10 |
33.0 |
-1.15 |
-0.24 |
12.8 |
80 |
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4 |
3 |
3 |
5 |
2 |
2 |
0 |
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2 |
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1.99 |
2.07 |
62.7 |
-0.74 |
-0.05 |
20.7 |
86 |
7 |
5 |
4 |
8 |
1 |
0 |
1 |
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3 |
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1.16 |
1.32 |
76.7 |
-1.48 |
-0.19 |
25.7 |
86 |
9 |
6 |
4 |
8 |
0 |
0 |
0 |
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4 |
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1.16 |
1.34 |
77.8 |
-2.02 |
-0.39 |
27.2 |
83 |
12 |
7 |
3 |
6 |
1 |
0 |
1 |
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5 |
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1.23 |
4.10 |
101.1 |
-0.26 |
-0.18 |
6.5 |
81 |
1 |
3 |
6 |
9 |
5 |
1 |
0 |
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6 |
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1.24 |
1.41 |
107.0 |
-2.35 |
-0.56 |
27.4 |
80 |
13 |
12 |
3 |
5 |
2 |
2 |
0 |
ADP 501 E
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7 |
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2.78 |
2.83 |
139.4 |
-2.19 |
-0.36 |
30.0 |
87 |
14 |
10 |
7 |
11 |
0 |
0 |
0 |
ADP 501 F
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8 |
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2.73 |
5.47 |
192.8 |
-2.18 |
-0.38 |
32.4 |
84 |
24 |
19 |
7 |
14 |
1 |
0 |
0 |
ADP 501 F
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program