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PDBsum entry 5j3v
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Tunnel analysis for: 5j3v calculated with  MOLE 2.0
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PDB id
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5j3v
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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7 tunnels,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.53 |
2.34 |
20.6 |
-1.98 |
-0.63 |
23.6 |
85 |
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4 |
3 |
1 |
1 |
0 |
1 |
0 |
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2 |
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1.26 |
1.48 |
25.8 |
-0.87 |
-0.23 |
23.1 |
87 |
3 |
2 |
3 |
5 |
1 |
0 |
0 |
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3 |
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1.47 |
2.25 |
30.5 |
-2.40 |
-0.73 |
30.1 |
87 |
4 |
4 |
2 |
1 |
0 |
0 |
0 |
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4 |
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1.20 |
2.65 |
18.7 |
3.30 |
1.11 |
0.5 |
69 |
0 |
0 |
1 |
9 |
3 |
0 |
0 |
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5 |
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1.16 |
1.44 |
19.5 |
3.17 |
1.04 |
1.4 |
68 |
1 |
0 |
1 |
7 |
1 |
0 |
0 |
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6 |
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1.17 |
2.70 |
22.9 |
2.27 |
0.93 |
3.4 |
73 |
0 |
1 |
2 |
7 |
4 |
0 |
0 |
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7 |
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1.34 |
3.37 |
16.2 |
2.13 |
0.74 |
1.3 |
80 |
0 |
0 |
1 |
5 |
3 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program