 |
PDBsum entry 5hf2
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 5hf2 calculated with MOLE 2.0
|
PDB id
|
|
|
|
5hf2
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
2 tunnels,
coloured by tunnel radius |
 |
4 tunnels,
coloured by
tunnel radius
|
4 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.91 |
1.91 |
16.3 |
2.09 |
0.56 |
4.9 |
73 |
 |
0 |
1 |
1 |
7 |
1 |
0 |
0 |
 |
U75 202 X
|
 |
 |
2 |
 |
1.78 |
1.83 |
17.7 |
2.04 |
0.58 |
6.6 |
76 |
0 |
1 |
1 |
6 |
1 |
0 |
0 |
U75 202 X
|
 |
3 |
 |
2.09 |
2.12 |
23.2 |
0.19 |
-0.24 |
5.6 |
87 |
1 |
0 |
2 |
5 |
1 |
0 |
0 |
XNP 201 X U75 202 X
|
 |
4 |
 |
1.76 |
1.86 |
25.3 |
0.17 |
-0.21 |
8.0 |
90 |
1 |
1 |
2 |
4 |
1 |
0 |
0 |
XNP 201 X U75 202 X
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |