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PDBsum entry 5fn8

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 5fn8 calculated with MOLE 2.0 PDB id
5fn8
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.31 2.31 28.3 -0.45 -0.03 12.5 74 3 1 1 3 2 1 1  
2 1.20 1.39 36.2 -1.23 -0.15 15.3 82 2 1 2 2 2 1 0  
3 2.28 3.57 27.3 0.39 0.14 7.0 70 2 2 0 5 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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