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PDBsum entry 5fn8
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Tunnel analysis for: 5fn8 calculated with  MOLE 2.0
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PDB id
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5fn8
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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16 tunnels,
coloured by tunnel radius |
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18 tunnels,
coloured by
tunnel radius
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18 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.50 |
2.69 |
15.0 |
0.31 |
0.03 |
8.2 |
72 |
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1 |
2 |
0 |
4 |
2 |
1 |
0 |
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2 |
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1.96 |
2.38 |
15.3 |
-0.49 |
-0.13 |
22.4 |
78 |
2 |
1 |
1 |
3 |
1 |
0 |
0 |
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3 |
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2.12 |
2.19 |
15.7 |
-0.28 |
-0.06 |
17.4 |
75 |
2 |
2 |
1 |
3 |
2 |
0 |
0 |
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4 |
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2.52 |
2.69 |
15.9 |
0.22 |
0.24 |
15.8 |
75 |
2 |
1 |
1 |
4 |
2 |
0 |
0 |
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5 |
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2.10 |
2.27 |
17.1 |
2.01 |
0.42 |
5.9 |
74 |
0 |
2 |
1 |
4 |
1 |
0 |
1 |
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6 |
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1.99 |
2.14 |
21.5 |
0.94 |
-0.12 |
6.1 |
80 |
0 |
3 |
0 |
5 |
0 |
0 |
0 |
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7 |
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2.24 |
2.52 |
27.6 |
-0.96 |
-0.04 |
16.1 |
76 |
3 |
2 |
0 |
3 |
1 |
1 |
0 |
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8 |
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2.50 |
2.69 |
30.6 |
-0.55 |
0.08 |
16.3 |
73 |
3 |
2 |
0 |
4 |
2 |
1 |
0 |
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9 |
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1.27 |
1.38 |
19.9 |
-0.98 |
-0.04 |
9.2 |
69 |
1 |
0 |
1 |
1 |
3 |
0 |
0 |
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10 |
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1.29 |
1.71 |
24.2 |
-0.92 |
-0.26 |
14.7 |
77 |
2 |
1 |
1 |
2 |
2 |
1 |
0 |
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11 |
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2.47 |
2.72 |
16.1 |
0.58 |
0.21 |
11.8 |
75 |
2 |
1 |
1 |
5 |
1 |
0 |
0 |
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12 |
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1.91 |
2.33 |
16.2 |
-0.18 |
-0.15 |
18.6 |
75 |
2 |
1 |
1 |
4 |
1 |
0 |
0 |
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13 |
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2.06 |
2.18 |
16.6 |
-0.29 |
-0.11 |
16.5 |
75 |
2 |
2 |
1 |
3 |
2 |
0 |
0 |
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14 |
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2.37 |
3.63 |
16.7 |
0.46 |
0.33 |
15.0 |
75 |
2 |
1 |
1 |
4 |
2 |
0 |
0 |
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15 |
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2.13 |
2.23 |
16.9 |
1.91 |
0.37 |
6.2 |
69 |
0 |
2 |
0 |
4 |
1 |
0 |
1 |
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16 |
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2.10 |
2.12 |
20.1 |
-1.13 |
-0.43 |
10.1 |
76 |
2 |
2 |
0 |
1 |
1 |
1 |
0 |
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17 |
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2.46 |
2.72 |
24.6 |
-0.16 |
-0.10 |
8.4 |
72 |
2 |
2 |
0 |
5 |
1 |
1 |
0 |
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18 |
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2.42 |
3.58 |
25.2 |
-0.20 |
-0.10 |
8.0 |
72 |
2 |
2 |
0 |
4 |
2 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program