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PDBsum entry 5flm

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Top Page protein dna_rna metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 5flm calculated with MOLE 2.0 PDB id
5flm
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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1 tunnel, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.20 2.07 141.0 -1.44 -0.42 18.4 81 14 9 6 6 5 5 0  C 7 P A 8 P A 10 P A 11 P DT 23 T DC 24 T
2 1.13 1.37 24.6 1.74 0.54 6.7 70 2 2 1 7 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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