PDBsum entry 5flm Go to PDB code:  Pore analysis for: 5flm calculated with MOLE 2.0 PDB id 5flm Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   28 pores, coloured by radius 28 pores, coloured by radius 28 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.50 2.70 46.1 -1.15 -0.22 13.8 85 5 0 3 5 1 1 0   2 1.27 2.81 49.5 0.82 0.23 6.8 83 3 1 3 11 2 2 0   3 1.10 1.45 61.5 -1.45 -0.22 21.2 78 9 5 5 5 6 3 0   4 2.92 3.07 69.1 -1.20 -0.53 14.8 79 9 3 6 3 0 0 0  DA 35 N DG 36 N DC 37 N DT 38 N DG 3 T DC 4 T DT 5 T DC 6 T DA 7 T DA 8 T DG 9 T 5 2.61 2.62 88.2 -1.66 -0.59 18.1 84 9 5 6 1 1 3 0  DC 8 N DT 9 N C 7 P A 8 P A 10 P A 11 P DT 23 T DC 24 T DA 25 T DT 26 T DA 28 T 6 2.48 2.49 97.5 -1.29 -0.50 17.8 78 9 4 3 3 1 1 0  DC 8 N DT 9 N DA 10 N DG 11 N DT 12 N DA 13 N DG 34 N DA 35 N DG 9 T DT 10 T DA 11 T DT 27 T 7 1.24 1.48 107.6 -0.81 -0.20 17.3 81 10 7 3 12 3 4 1   8 1.29 3.41 118.5 -0.76 -0.13 14.1 83 12 5 10 16 4 5 0   9 2.55 3.79 115.3 -2.11 -0.31 27.6 82 12 6 3 8 3 3 0   10 1.23 1.48 118.3 -1.70 -0.58 20.7 86 14 7 7 5 3 1 0  DC 8 N DT 9 N C 7 P A 8 P A 10 P A 11 P DT 23 T DC 24 T DA 25 T DT 26 T DA 28 T 11 1.30 3.41 139.9 -1.00 -0.29 16.6 81 11 8 7 11 4 4 1  DC 8 N DT 9 N C 7 P A 8 P A 10 P A 11 P DT 23 T DC 24 T DA 25 T DT 26 T DA 28 T 12 1.86 1.98 146.0 -1.49 -0.36 17.0 83 14 8 15 10 5 8 0  C 7 P A 8 P 13 2.51 2.69 147.4 -1.78 -0.29 23.7 77 17 5 5 3 5 2 0  DA 7 N DC 8 N DA 26 N DG 28 N DT 29 N DA 30 N DC 31 N DT 32 N DG 3 T DC 4 T DT 5 T DC 6 T DA 8 T DG 9 T DT 10 T DC 12 T DC 29 T DT 30 T 14 1.26 1.25 148.4 -2.29 -0.59 25.0 86 10 7 6 6 1 1 0   15 1.51 1.65 151.7 -1.61 -0.45 19.1 84 15 9 16 8 5 3 0  DC 8 N DT 9 N C 7 P A 8 P A 10 P A 11 P DT 23 T DC 24 T DA 25 T DT 26 T DA 28 T 16 1.72 1.72 157.4 -1.75 -0.45 20.9 81 14 11 7 6 4 2 1  DA 26 N DG 28 N DA 35 N DA 8 T DG 9 T DT 10 T DC 12 T 17 1.24 1.24 152.7 -2.35 -0.46 25.5 82 11 7 5 6 3 3 0   18 1.74 2.48 165.6 -1.95 -0.54 20.7 84 21 7 15 4 4 2 0  DA 35 N DA 8 T DG 9 T 19 2.60 3.29 167.1 -1.78 -0.48 21.0 81 18 6 9 8 2 2 0  DA 35 N DG 36 N DC 37 N DT 38 N DT 5 T DC 6 T DA 7 T DA 8 T DG 9 T 20 1.35 1.34 178.2 -1.81 -0.43 22.0 83 17 10 9 6 3 4 0   21 1.23 1.60 201.0 -1.69 -0.54 21.1 84 21 10 9 6 5 2 0  DA 26 N DG 28 N DA 35 N C 7 P A 8 P A 10 P C 15 P C 16 P DA 8 T DG 9 T DT 10 T DC 12 T DA 16 T DC 19 T DT 20 T DG 21 T DG 22 T 22 1.42 1.74 209.8 -1.91 -0.52 22.2 82 18 12 10 5 2 3 0  DC 8 N DT 9 N A 10 P A 11 P C 15 P C 16 P G 18 P G 19 P C 20 P DA 16 T DC 18 T DC 19 T DT 20 T DG 21 T DG 22 T DT 23 T DC 24 T DA 25 T DT 26 T DA 28 T 23 1.23 1.22 210.8 -1.99 -0.44 25.6 83 17 11 7 12 4 2 0   24 1.24 1.23 220.5 -1.17 -0.28 15.6 83 17 9 14 11 8 4 0   25 2.25 2.51 201.1 -2.87 -0.51 36.5 78 16 12 1 2 1 1 1  DC 8 N DT 9 N 26 1.27 1.26 211.9 -1.62 -0.29 20.6 80 14 9 8 9 7 2 0   27 1.31 1.65 216.6 -1.37 -0.51 16.7 86 18 12 13 12 4 4 0  C 7 P A 8 P 28 1.27 1.71 255.5 -1.77 -0.49 21.4 85 23 16 15 10 5 4 0  C 7 P A 8 P A 10 P C 15 P C 16 P G 18 P G 19 P C 20 P DA 16 T DC 18 T DC 19 T DT 20 T DG 21 T DG 22 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.