PDBsum entry 5ejs

Tunnel analysis for: 5ejs calculated with

MOLE 2.0

PDB id

5ejs

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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without HETATM:

9 tunnels, coloured by tunnel radius

9 tunnels, coloured by tunnel radius

9 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.27

2.20

26.1

-0.79

-0.28

16.4

80

4

1

2

4

1

1

1

2

1.27

2.18

31.4

-1.74

-0.39

22.8

80

4

3

4

5

2

0

1

3

1.26

2.06

35.4

-1.01

-0.22

15.2

77

6

1

3

4

2

2

1

4

1.30

2.28

26.6

-0.86

-0.27

17.8

77

4

1

2

4

1

1

1

5

1.31

2.26

27.0

-0.78

-0.14

15.6

73

6

1

3

4

2

1

1

6

1.44

2.51

16.6

-1.28

-0.13

6.9

83

0

3

4

2

4

1

0

7

1.25

1.33

15.9

1.78

0.14

1.4

75

2

0

1

4

1

1

0

8

1.15

2.73

19.2

-2.11

-0.59

19.7

84

3

1

4

2

0

1

0

9

1.26

1.26

26.1

-2.10

-0.56

16.0

76

2

1

6

1

2

1

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.