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PDBsum entry 5eh2

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Top Page protein dna_rna metals Protein-protein interface(s) pores links
Pore analysis for: 5eh2 calculated with MOLE 2.0 PDB id
5eh2
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.32 1.32 28.7 -1.85 -0.51 24.8 83 5 1 0 0 1 0 0  DG 13 C DG 14 C DA 15 C DG 16 C
2 1.33 1.33 34.6 -2.92 -0.46 36.3 92 5 1 2 0 0 0 0  DG 12 C DG 13 C DG 14 C DA 15 C DC 18 C DC 19 C
DT 1 D DG 2 D DA 3 D DG 4 D DG 5 D DC 6 D DG 14 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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