 |
PDBsum entry 5eh2
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 5eh2 calculated with  MOLE 2.0
|
PDB id
|
|
|
|
5eh2
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
7 tunnels,
coloured by tunnel radius |
|
8 tunnels,
coloured by
tunnel radius
|
8 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.13 |
1.13 |
17.3 |
-1.53 |
-0.54 |
18.7 |
81 |
|
5 |
0 |
0 |
0 |
1 |
0 |
0 |
|
DA 11 C DG 12 C DG 13 C
|
 |
|
2 |
 |
1.12 |
1.12 |
27.4 |
-1.73 |
-0.43 |
23.0 |
78 |
4 |
0 |
0 |
1 |
1 |
0 |
0 |
DG 12 C DG 13 C DC 7 D DT 8 D
|
|
3 |
 |
1.18 |
1.18 |
23.5 |
-1.61 |
-0.66 |
18.8 |
82 |
6 |
1 |
0 |
0 |
1 |
0 |
0 |
DA 11 A DG 12 A DG 13 A
|
|
4 |
 |
1.55 |
1.55 |
17.6 |
-1.16 |
-0.60 |
10.5 |
91 |
3 |
0 |
3 |
0 |
1 |
0 |
0 |
DG 7 A DG 8 A DC 9 A DT 10 A
|
|
5 |
 |
1.17 |
1.19 |
27.2 |
-1.28 |
-0.43 |
15.8 |
90 |
3 |
0 |
3 |
0 |
2 |
0 |
0 |
DG 5 A DT 6 A DG 7 A DG 8 A DC 9 A DT 10 A DG 14
B DC 15 B
|
|
6 |
 |
1.18 |
1.41 |
15.6 |
-1.62 |
-0.47 |
21.9 |
84 |
2 |
0 |
1 |
1 |
0 |
0 |
0 |
DG 5 C DT 12 D DA 13 D DG 14 D DC 15 D
|
|
7 |
 |
1.26 |
1.26 |
17.6 |
-0.63 |
-0.73 |
5.8 |
92 |
2 |
0 |
2 |
0 |
1 |
0 |
0 |
DG 8 C DC 9 C DT 10 C
|
 |
8 |
 |
1.41 |
1.41 |
21.1 |
-1.12 |
-0.66 |
9.8 |
91 |
3 |
0 |
3 |
0 |
1 |
0 |
0 |
DG 7 C DG 8 C DC 9 C DT 10 C
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program