PDBsum entry 5e6j Go to PDB code:  Pore analysis for: 5e6j calculated with MOLE 2.0 PDB id 5e6j Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.51 1.63 33.7 0.14 0.03 10.7 82 2 1 1 4 3 1 0   2 1.33 1.48 43.2 0.40 0.19 10.5 80 3 1 3 6 3 0 0  5MW 48 B 3 1.48 1.78 57.4 -1.60 -0.59 22.6 85 7 5 4 5 0 0 0   4 1.49 1.79 67.0 0.06 -0.20 7.7 87 3 2 4 7 2 0 0   5 1.49 1.79 67.3 0.16 0.02 9.5 86 4 1 3 9 2 0 0   6 1.64 2.05 72.2 -1.71 -0.61 25.9 84 5 6 1 3 0 0 0   7 1.64 2.05 73.6 -2.24 -0.61 22.5 81 5 7 5 3 2 2 0   8 1.51 1.64 85.9 -0.81 -0.23 16.6 86 8 4 5 8 2 1 0   9 1.51 1.52 85.7 -0.87 -0.38 15.6 87 6 6 6 6 2 0 0   10 2.25 2.41 91.0 -1.58 -0.55 17.1 82 7 8 7 6 1 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.