PDBsum entry 5d6h Go to PDB code:  Pore analysis for: 5d6h calculated with MOLE 2.0 PDB id 5d6h Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 3.17 37.0 1.74 0.45 4.5 89 0 1 1 12 2 0 0  MSE 114 A 2 1.78 1.80 46.9 -1.48 -0.38 14.7 82 4 4 4 3 3 2 0   3 1.16 1.34 62.1 -1.28 -0.36 15.3 82 5 4 7 4 5 1 0   4 1.77 1.81 94.4 -1.73 -0.49 15.8 84 6 5 7 5 3 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.