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PDBsum entry 5co0
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Tunnel analysis for: 5co0 calculated with  MOLE 2.0
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PDB id
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5co0
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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7 tunnels,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.22 |
1.23 |
24.4 |
1.20 |
0.30 |
4.8 |
64 |
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1 |
1 |
0 |
3 |
3 |
0 |
0 |
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DC 12 D DA 12 E DG 13 E DC 14 E
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2 |
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1.17 |
1.18 |
24.9 |
1.10 |
0.28 |
5.2 |
64 |
1 |
1 |
0 |
3 |
3 |
0 |
0 |
DC 12 D DA 12 E DG 13 E DC 14 E
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3 |
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1.30 |
2.29 |
37.2 |
-0.56 |
-0.10 |
19.1 |
66 |
3 |
2 |
0 |
3 |
3 |
1 |
0 |
DG 7 D DG 8 D DG 9 D DG 13 E
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4 |
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1.31 |
2.33 |
37.6 |
-0.54 |
-0.10 |
19.0 |
66 |
3 |
2 |
0 |
3 |
3 |
1 |
0 |
DG 7 D DG 8 D DG 9 D DG 13 E
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5 |
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1.21 |
1.59 |
40.3 |
-0.30 |
0.10 |
19.9 |
68 |
3 |
2 |
0 |
3 |
3 |
0 |
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DG 9 D DC 10 D DT 11 D DG 13 E
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6 |
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1.25 |
1.59 |
40.7 |
-0.36 |
0.10 |
20.4 |
68 |
3 |
2 |
0 |
3 |
3 |
0 |
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DG 9 D DC 10 D DT 11 D DG 13 E
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7 |
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1.22 |
3.55 |
17.1 |
2.07 |
0.74 |
7.9 |
81 |
1 |
1 |
1 |
9 |
2 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program