PDBsum entry 5a8h Go to PDB code:  Tunnel analysis for: 5a8h calculated with MOLE 2.0 PDB id 5a8h Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.24 1.24 16.7 -0.10 -0.40 7.0 73 0 2 2 3 2 1 0   2 1.25 1.25 22.7 -0.14 -0.41 5.0 70 0 1 2 3 3 1 0   3 1.24 1.24 16.7 -0.10 -0.40 7.0 73 0 2 2 3 2 1 0   4 1.25 1.25 22.7 -0.07 -0.38 5.0 70 0 1 2 3 3 1 0   5 1.24 1.24 16.7 -0.15 -0.42 7.3 73 0 2 2 3 2 1 0   6 1.25 1.25 22.8 -0.12 -0.40 5.1 70 0 1 2 3 3 1 0   7 1.32 1.93 16.2 -1.74 -0.60 12.7 72 2 0 1 1 0 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.