 |
PDBsum entry 4zpz
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 4zpz calculated with  MOLE 2.0
|
PDB id
|
|
|
|
4zpz
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
5 tunnels,
coloured by tunnel radius |
|
4 tunnels,
coloured by
tunnel radius
|
4 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.37 |
1.59 |
17.4 |
0.21 |
0.08 |
8.2 |
86 |
|
1 |
0 |
2 |
4 |
1 |
0 |
0 |
|
SEP 65 A
|
 |
|
2 |
 |
1.36 |
1.58 |
19.9 |
0.31 |
0.07 |
7.1 |
82 |
2 |
0 |
2 |
3 |
1 |
0 |
0 |
SEP 65 A
|
|
3 |
 |
1.37 |
1.57 |
24.8 |
0.35 |
0.13 |
10.8 |
76 |
2 |
1 |
1 |
4 |
1 |
0 |
0 |
SEP 65 A
|
 |
4 |
 |
1.37 |
1.59 |
25.8 |
0.87 |
0.24 |
6.8 |
73 |
2 |
0 |
1 |
3 |
2 |
0 |
2 |
SEP 65 A SEP 65 B
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program