PDBsum entry 4ypr Go to PDB code:  Pore analysis for: 4ypr calculated with MOLE 2.0 PDB id 4ypr Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.51 2.56 48.1 -0.77 -0.30 14.7 80 5 0 1 2 0 1 1  DG 13 E DT 14 E DC 15 E DC 16 E DG 19 E DT 20 E DC 21 E DT 22 E DA 2 F DG 3 F DA 4 F DC 5 F DG 8 F 2 1.42 1.56 77.0 -1.38 -0.32 18.9 81 7 1 2 2 0 3 1  DG 13 E DT 14 E DC 15 E DC 16 E DA 17 E DG 19 E DT 20 E DC 21 E DT 22 E DC 11 F 3 1.76 1.75 81.9 -1.41 -0.62 21.3 81 7 6 0 4 0 0 0  DG 13 E DT 14 E DC 15 E DC 16 E DG 19 E DA 2 F DG 3 F DA 4 F DC 5 F DG 8 F 4 1.31 1.61 81.9 -1.64 -0.51 20.1 81 7 1 1 2 0 2 0  DG 13 E DT 14 E DC 15 E DC 16 E DA 17 E DG 19 E DC 5 F DG 8 F DC 11 F 5 2.51 2.71 40.1 -1.12 -0.32 18.9 77 4 0 0 3 0 1 1  DG 13 C DT 14 C DC 15 C DC 16 C DG 19 C DT 20 C DC 21 C DT 22 C DC 5 D DG 8 D DG 9 D 6 1.40 1.40 49.8 -0.82 -0.41 13.0 75 5 2 1 2 3 0 0  DG 13 C DT 22 C DC 5 D 8OG 6 D DT 7 D DG 8 D DG 9 D 7 1.57 1.60 58.9 -1.83 -0.49 21.1 75 7 0 0 1 0 2 1  DC 15 C DC 16 C DG 19 C DT 20 C DC 21 C DT 22 C DC 5 D DC 11 D 8 1.67 1.76 61.8 -0.81 -0.49 11.6 89 3 0 0 2 0 1 0  DG 13 C DT 14 C DC 15 C DC 16 C DG 8 D DG 9 D DC 11 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.