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PDBsum entry 4ynm
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Pore analysis for: 4ynm calculated with  MOLE 2.0
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PDB id
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4ynm
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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2 pores,
coloured by radius |
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6 pores,
coloured by radius
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6 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.10 |
2.11 |
26.0 |
-2.66 |
-0.64 |
32.6 |
81 |
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6 |
3 |
3 |
2 |
0 |
1 |
0 |
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2 |
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1.17 |
1.31 |
31.1 |
-1.33 |
-0.28 |
13.5 |
85 |
7 |
3 |
4 |
3 |
1 |
0 |
2 |
SAM 2304 B
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3 |
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1.16 |
1.30 |
41.1 |
-1.35 |
-0.41 |
16.5 |
83 |
6 |
3 |
5 |
2 |
1 |
2 |
2 |
SAM 2304 B
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4 |
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1.13 |
1.21 |
42.1 |
-1.18 |
-0.39 |
12.1 |
86 |
9 |
1 |
9 |
2 |
2 |
1 |
3 |
SAM 2304 A
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5 |
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1.96 |
1.96 |
46.5 |
-2.34 |
-0.44 |
26.0 |
78 |
12 |
5 |
6 |
3 |
4 |
2 |
0 |
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6 |
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1.67 |
1.84 |
46.4 |
-1.62 |
-0.32 |
15.0 |
84 |
6 |
4 |
6 |
3 |
2 |
2 |
0 |
SAM 2304 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program