PDBsum entry 4ynm Go to PDB code:  Tunnel analysis for: 4ynm calculated with MOLE 2.0 PDB id 4ynm Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.31 3.39 27.1 -0.11 0.01 14.3 80 4 4 1 9 1 1 0   2 1.35 2.41 28.9 0.37 0.09 12.4 73 2 5 2 10 1 2 0   3 1.35 2.21 30.1 -0.08 0.00 11.5 77 4 5 1 10 1 1 0   4 1.28 3.17 34.1 -0.32 0.06 16.8 76 6 5 1 9 1 1 0   5 1.35 3.17 40.2 -0.24 0.03 15.9 78 5 6 1 10 1 1 0   6 1.34 2.42 42.4 -0.88 -0.08 19.1 77 5 5 6 10 4 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.