PDBsum entry 4ycz Go to PDB code:  Pore analysis for: 4ycz calculated with MOLE 2.0 PDB id 4ycz Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   14 pores, coloured by radius 16 pores, coloured by radius 16 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.68 1.68 27.9 0.93 0.19 2.6 56 1 0 0 5 3 0 0  MSE 882 B 2 1.46 1.73 33.2 0.66 0.22 2.8 57 1 0 0 4 3 1 0  MSE 882 B 3 1.40 1.59 33.8 1.44 0.27 2.1 71 1 0 2 5 4 1 1   4 1.43 1.42 107.3 -0.42 -0.16 12.6 81 9 5 13 18 5 4 0   5 1.47 1.52 129.0 -0.31 -0.21 10.4 78 6 6 8 26 2 5 0  MSE 1157 B 6 1.29 1.29 134.3 -1.23 -0.25 18.4 77 16 9 12 16 9 5 0   7 1.17 1.38 139.7 -0.55 -0.36 11.4 84 4 13 9 10 3 7 0   8 1.86 2.53 139.7 -0.50 -0.32 11.1 83 8 4 9 18 2 10 0   9 2.05 2.53 186.4 -0.84 -0.35 16.4 79 11 12 11 19 3 7 0   10 2.45 2.45 192.3 -1.26 -0.34 16.5 81 11 15 15 15 7 2 0   11 1.30 1.28 207.4 -0.83 -0.30 12.0 79 13 10 24 20 9 5 0   12 1.32 1.32 212.0 -0.57 -0.27 16.7 74 5 10 3 10 5 2 0  MSE 365 B MSE 815 B 13 1.34 1.33 237.6 -0.53 -0.24 11.9 77 12 13 18 24 9 11 0   14 1.26 1.46 264.5 -0.98 -0.35 13.3 80 14 19 21 23 8 13 0   15 1.18 1.23 280.6 -0.73 -0.30 10.7 79 15 17 30 28 11 16 0   16 1.40 1.54 355.0 -0.49 -0.27 9.6 79 16 20 28 43 9 21 0  MSE 1157 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.