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PDBsum entry 4xqk

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Top Page protein dna_rna metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4xqk calculated with MOLE 2.0 PDB id
4xqk
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.10 3.06 42.5 2.82 1.08 1.6 82 0 2 2 15 4 0 0  
2 1.12 3.04 44.8 2.75 1.01 2.6 82 1 2 2 15 4 0 0  
3 1.15 1.75 18.8 1.17 0.44 13.7 76 2 2 0 5 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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