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PDBsum entry 4oi8
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Pore analysis for: 4oi8 calculated with MOLE 2.0
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PDB id
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4oi8
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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10 pores,
coloured by radius |
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10 pores,
coloured by radius
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10 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.59 |
2.65 |
26.3 |
-1.14 |
-0.47 |
12.2 |
78 |
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2 |
0 |
1 |
3 |
0 |
1 |
0 |
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DG 12 E DG 13 E DC 17 E DT 18 E DT 11 F DT 12 F DC 13 F
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2 |
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2.09 |
2.12 |
31.7 |
-1.23 |
-0.55 |
15.7 |
81 |
3 |
0 |
0 |
3 |
0 |
1 |
0 |
DT 20 E DA 21 E DG 22 E DA 23 E DG 7 F DA 8 F DG 9 F
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3 |
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2.95 |
2.98 |
31.9 |
-1.83 |
-0.07 |
21.5 |
81 |
5 |
0 |
1 |
1 |
1 |
0 |
0 |
DT 8 E DG 9 E DT 10 E DG 12 E DG 13 E DT 11 F DT 12 F DC 13 F DC 14 F DT 15 F DA 22 F
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4 |
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2.00 |
3.37 |
33.8 |
-0.71 |
-0.34 |
14.3 |
83 |
4 |
1 |
3 |
3 |
0 |
1 |
0 |
DG 13 E DT 20 E DT 11 F DT 12 F
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5 |
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2.16 |
2.16 |
34.4 |
-1.44 |
-0.78 |
13.2 |
77 |
3 |
1 |
1 |
0 |
0 |
0 |
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DC 17 E DT 18 E DC 19 E DT 20 E DG 9 F DT 10 F DT 11 F DT 12 F DC 13 F
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6 |
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1.80 |
1.80 |
36.9 |
-1.19 |
-0.73 |
12.7 |
80 |
3 |
0 |
1 |
0 |
0 |
0 |
0 |
DC 17 E DT 18 E DC 19 E DT 20 E DA 21 E DG 22 E DG 7 F DA 8 F DG 9 F DT 10 F DT 11 F DT 12 F DC 13 F
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7 |
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2.43 |
2.97 |
37.7 |
-0.84 |
-0.10 |
16.7 |
81 |
4 |
1 |
0 |
4 |
1 |
0 |
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DT 8 E DG 9 E DT 10 E DC 17 E DT 18 E DT 12 F DC 13 F DC 14 F DT 15 F
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8 |
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1.97 |
3.39 |
54.1 |
-1.06 |
-0.22 |
18.9 |
82 |
7 |
2 |
2 |
3 |
1 |
2 |
0 |
DT 8 E DG 9 E DT 10 E DT 20 E DT 11 F DT 12 F DC 13 F DC 14 F DT 15 F
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9 |
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1.80 |
1.80 |
58.7 |
-0.97 |
-0.48 |
14.5 |
85 |
5 |
1 |
4 |
3 |
0 |
2 |
0 |
DG 13 E DC 19 E DT 20 E DA 21 E DG 22 E DG 7 F DA 8 F DG 9 F DT 10 F DT 11 F DT 12 F
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10 |
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1.80 |
1.80 |
67.3 |
-1.03 |
-0.33 |
17.4 |
82 |
8 |
2 |
2 |
3 |
1 |
2 |
0 |
DT 8 E DG 9 E DT 10 E DC 19 E DT 20 E DA 21 E DG 22 E DG 7 F DA 8 F DG 9 F DT 10 F DT 11 F DT 12 F DC 13 F DC 14 F DT 15 F DA 22 F
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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