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PDBsum entry 4ki0

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4ki0 calculated with MOLE 2.0 PDB id
4ki0
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.32 5.00 39.3 -2.07 -0.59 24.6 89 5 6 8 3 0 2 0  
2 1.57 1.57 39.9 -1.45 -0.34 23.4 87 6 4 5 4 0 2 0  
3 1.57 1.57 43.4 -1.44 -0.38 23.4 90 7 4 7 6 0 2 0  
4 1.38 3.05 15.7 2.91 0.96 0.4 71 0 0 1 8 4 0 0  PGV 606 F UMQ 305 G
5 1.23 1.45 19.5 -0.72 -0.62 10.6 79 1 1 0 3 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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