 |
PDBsum entry 4ki0
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 4ki0 calculated with  MOLE 2.0
|
PDB id
|
|
|
|
4ki0
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
23 pores,
coloured by radius |
|
28 pores,
coloured by radius
|
28 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.26 |
1.26 |
25.4 |
-0.75 |
-0.28 |
14.4 |
84 |
|
1 |
5 |
3 |
2 |
2 |
0 |
0 |
|
|
 |
|
2 |
 |
1.11 |
3.25 |
33.4 |
-1.45 |
-0.33 |
16.2 |
75 |
3 |
4 |
1 |
2 |
3 |
2 |
0 |
PGV 606 F
|
|
3 |
 |
2.58 |
4.04 |
35.8 |
0.12 |
0.19 |
6.7 |
72 |
1 |
1 |
2 |
5 |
4 |
2 |
1 |
PGV 605 F
|
|
4 |
 |
2.49 |
2.71 |
43.0 |
-1.55 |
-0.33 |
19.4 |
78 |
5 |
5 |
3 |
4 |
3 |
2 |
0 |
ANP 402 B PGV 605 F
|
|
5 |
 |
2.07 |
2.06 |
47.4 |
-1.21 |
-0.41 |
17.7 |
86 |
5 |
4 |
3 |
5 |
1 |
2 |
0 |
ANP 402 B
|
|
6 |
 |
1.63 |
1.62 |
50.3 |
-1.89 |
-0.53 |
18.1 |
82 |
4 |
5 |
10 |
3 |
3 |
2 |
0 |
|
|
7 |
 |
2.69 |
2.79 |
50.3 |
-2.50 |
-0.62 |
20.9 |
87 |
5 |
4 |
5 |
1 |
0 |
2 |
0 |
|
|
8 |
 |
1.50 |
1.69 |
51.7 |
-1.51 |
-0.28 |
12.8 |
81 |
4 |
5 |
7 |
3 |
3 |
1 |
0 |
|
|
9 |
 |
2.49 |
2.67 |
52.0 |
-1.19 |
-0.22 |
20.6 |
85 |
6 |
4 |
2 |
5 |
1 |
0 |
0 |
ANP 402 B
|
|
10 |
 |
2.08 |
2.08 |
53.4 |
-2.00 |
-0.59 |
22.3 |
79 |
5 |
7 |
4 |
3 |
2 |
5 |
0 |
PGV 605 F
|
|
11 |
 |
1.52 |
1.64 |
58.0 |
-1.47 |
-0.36 |
18.0 |
78 |
3 |
8 |
8 |
4 |
5 |
2 |
0 |
|
|
12 |
|
2.49 |
2.70 |
58.0 |
-0.51 |
-0.02 |
15.5 |
74 |
4 |
4 |
2 |
7 |
5 |
2 |
1 |
ANP 402 B PGV 605 F
|
|
13 |
|
1.61 |
1.61 |
58.4 |
-1.35 |
-0.17 |
16.9 |
74 |
4 |
4 |
6 |
4 |
4 |
2 |
0 |
|
|
14 |
|
1.62 |
1.61 |
59.6 |
-2.32 |
-0.53 |
20.2 |
82 |
5 |
8 |
9 |
2 |
2 |
3 |
0 |
|
|
15 |
|
1.89 |
2.34 |
59.4 |
-2.18 |
-0.70 |
16.6 |
89 |
6 |
3 |
7 |
3 |
0 |
1 |
0 |
|
|
16 |
|
1.70 |
1.70 |
60.0 |
-1.01 |
-0.16 |
13.6 |
77 |
3 |
3 |
7 |
7 |
6 |
1 |
0 |
|
|
17 |
|
2.08 |
2.06 |
60.5 |
-1.96 |
-0.59 |
26.3 |
84 |
6 |
6 |
3 |
4 |
1 |
2 |
0 |
|
|
18 |
|
1.70 |
1.70 |
60.7 |
-0.80 |
0.06 |
15.8 |
72 |
5 |
4 |
6 |
7 |
7 |
1 |
0 |
|
|
19 |
|
1.53 |
1.63 |
64.1 |
-0.48 |
0.04 |
14.9 |
73 |
3 |
6 |
5 |
8 |
8 |
1 |
0 |
|
|
20 |
|
1.55 |
1.73 |
63.8 |
-2.55 |
-0.82 |
19.3 |
87 |
5 |
3 |
9 |
1 |
0 |
0 |
0 |
UMQ 401 E
|
|
21 |
|
2.13 |
2.12 |
64.7 |
-1.09 |
-0.28 |
18.1 |
76 |
4 |
6 |
3 |
5 |
4 |
4 |
1 |
PGV 605 F
|
|
22 |
|
1.70 |
1.70 |
67.9 |
-1.99 |
-0.38 |
19.6 |
79 |
7 |
10 |
10 |
4 |
4 |
2 |
0 |
|
|
23 |
|
1.48 |
1.72 |
74.2 |
-2.36 |
-0.85 |
24.4 |
90 |
4 |
10 |
7 |
1 |
0 |
1 |
0 |
|
|
24 |
|
1.76 |
1.88 |
101.8 |
-2.38 |
-0.77 |
25.1 |
86 |
7 |
8 |
8 |
3 |
0 |
1 |
0 |
|
|
25 |
|
1.26 |
1.84 |
117.6 |
-0.41 |
0.04 |
14.1 |
73 |
8 |
7 |
6 |
17 |
11 |
3 |
0 |
GLC 1 C GLC 2 C GLC 3 C
|
|
26 |
|
1.64 |
2.24 |
29.2 |
-0.68 |
0.01 |
19.8 |
87 |
6 |
4 |
4 |
5 |
0 |
1 |
0 |
|
|
27 |
|
1.18 |
1.18 |
30.1 |
-0.64 |
-0.36 |
8.4 |
90 |
4 |
0 |
4 |
6 |
0 |
0 |
0 |
|
 |
28 |
|
1.30 |
5.13 |
50.1 |
-1.34 |
-0.23 |
18.4 |
89 |
6 |
4 |
8 |
7 |
0 |
3 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program