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PDBsum entry 4k8h

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protein ligands metals links
Oxidoreductase PDB id
4k8h

 

 

 

 

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Contents
Protein chain
399 a.a.
Ligands
FMN
07V
PGE
1PE
Metals
_CL ×2
_NA ×2
Waters ×542
PDB id:
4k8h
Name: Oxidoreductase
Title: Oye1-w116v complexed with (r)-carvone
Structure: NADPH dehydrogenase 1. Chain: a. Synonym: old yellow enzyme 1. Engineered: yes. Mutation: yes
Source: Saccharomyces pastorianus. Lager yeast. Organism_taxid: 27292. Gene: oye1. Expressed in: escherichia coli. Expression_system_taxid: 469008.
Resolution:
1.55Å     R-factor:   0.128     R-free:   0.162
Authors: B.Sullivan,Y.A.Pompeu,J.D.Stewart
Key ref: Y.A.Pompeu et al. (2013). X‑. Acs catalysis, 3, 2376.
Date:
18-Apr-13     Release date:   09-Oct-13    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q02899  (OYE1_SACPS) -  NADPH dehydrogenase 1 from Saccharomyces pastorianus
Seq:
Struc:
400 a.a.
399 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.1.6.99.1  - Nadph dehydrogenase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: A + NADPH + H+ = AH2 + NADP+

+ NADPH
+ H(+)
= AH2
+ NADP(+)
      Cofactor: FMN or FAD
FMN
Bound ligand (Het Group name = FMN) corresponds exactly
or FAD
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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