PDBsum entry 4j2b Go to PDB code:  Pore analysis for: 4j2b calculated with MOLE 2.0 PDB id 4j2b Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.52 1.53 26.5 -1.03 -0.63 9.0 89 3 0 3 0 1 1 0  DC 104 P DT 109 P DG 110 P DC 111 P DA 11 T DG 12 T 2 2.08 2.08 29.9 -1.09 -0.57 17.2 84 2 1 0 2 0 0 0  DG 110 P DC 111 P DT 112 P DT 113 P DT 1 T DT 4 T DA 5 T DT 6 T 3 2.10 2.11 42.5 -0.83 -0.21 20.0 85 3 3 1 5 1 0 0  ATP 1001 A CA 1005 A DG 110 P DC 111 P DT 112 P DT 113 P DA 114 P DT 115 P DT 1 T DT 4 T DA 5 T DT 6 T 4 2.01 2.01 55.5 -1.39 -0.33 22.6 81 6 6 1 5 2 0 0  ATP 1001 A CA 1005 A DT 113 P DA 114 P DT 115 P DT 1 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.