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PDBsum entry 4i2o
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Pore analysis for: 4i2o calculated with  MOLE 2.0
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PDB id
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4i2o
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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6 pores,
coloured by radius |
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6 pores,
coloured by radius
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6 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.03 |
2.03 |
29.3 |
-0.64 |
-0.64 |
8.9 |
79 |
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3 |
0 |
0 |
1 |
1 |
0 |
0 |
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DT 24 W DA 25 W DG 26 W DG 27 W DA 5 X DT 6 X DC
7 X DT 8 X DT 9 X DG 10 X
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2 |
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1.46 |
2.41 |
37.4 |
0.47 |
-0.01 |
5.0 |
75 |
1 |
2 |
1 |
4 |
0 |
2 |
0 |
DG 27 W DA 5 X
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3 |
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1.46 |
2.39 |
47.2 |
-0.10 |
-0.33 |
5.8 |
76 |
2 |
1 |
1 |
5 |
1 |
2 |
0 |
DT 24 W DA 25 W DG 26 W DG 27 W DT 6 X DC 7 X DT
8 X DT 9 X
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4 |
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2.56 |
2.56 |
58.0 |
-0.98 |
-0.77 |
10.1 |
89 |
3 |
3 |
0 |
0 |
0 |
0 |
0 |
DG 5 W DA 7 W DA 15 W DA 16 W DA 17 W DT 18 W DC
19 W DC 15 X DA 16 X DA 17 X DT 18 X DC 19 X DA
20 X DA 21 X
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5 |
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2.58 |
2.58 |
61.5 |
-1.23 |
-0.72 |
11.9 |
89 |
4 |
2 |
2 |
2 |
0 |
0 |
0 |
DA 15 W DA 16 W DA 17 W DT 18 W DC 19 W DT 24 W
DT 9 X DG 10 X DT 12 X DC 15 X DA 16 X DA 17 X DT
18 X
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6 |
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1.47 |
2.10 |
37.6 |
-1.93 |
-0.57 |
30.1 |
82 |
7 |
4 |
1 |
5 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program