spacer
spacer

PDBsum entry 4hc1

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 4hc1 calculated with MOLE 2.0 PDB id
4hc1
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.21 1.47 20.8 -1.42 -0.62 18.4 84 2 2 2 1 1 1 0  
2 1.20 1.47 22.6 -1.06 -0.63 13.7 89 1 2 2 1 1 1 0  
3 1.21 1.31 24.1 -1.17 -0.69 12.2 85 1 2 2 0 1 1 0  
4 1.40 2.21 16.3 -0.14 -0.47 1.9 96 0 0 4 2 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer