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PDBsum entry 4grl

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Immune system PDB id
4grl
Contents
Protein chains
182 a.a.
181 a.a.
191 a.a.
257 a.a.
Ligands
NAG
Waters ×35

References listed in PDB file
Key reference
Title Crossreactivity of a human autoimmune tcr is dominated by a single tcr loop.
Authors D.K.Sethi, S.Gordo, D.A.Schubert, K.W.Wucherpfennig.
Ref. Nat Commun, 2013, 4, 2623. [DOI no: 10.1038/ncomms3623]
PubMed id 24136005
Abstract
Self-reactive CD4 T cells are thought to have a central role in the pathogenesis of many chronic inflammatory human diseases. Microbial peptides can activate self-reactive T cells, but the structural basis for such crossreactivity is not well understood. The Hy.1B11 T cell receptor (TCR) originates from a patient with multiple sclerosis and recognizes the self-antigen myelin basic protein. Here we report the structural mechanism of TCR crossreactivity with two distinct peptides from human pathogens. The structures show that a single TCR residue (CDR3α F95) makes the majority of contacts with the self-peptide and both microbial peptides (66.7-80.6%) due to a highly tilted TCR-binding topology on the peptide-MHC surface. Further, a neighbouring residue located on the same TCR loop (CDR3α E98) forms an energetically critical interaction with the MHC molecule. These data show how binding by a self-reactive TCR favors crossreactivity between self and microbial antigens.
PROCHECK
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 Headers

 

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