spacer
spacer

PDBsum entry 4grl

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 4grl calculated with MOLE 2.0 PDB id
4grl
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.68 2.48 20.2 -2.59 -0.43 30.0 84 3 2 3 1 2 0 0  
2 1.36 1.47 20.4 0.26 0.00 6.1 82 2 1 2 3 4 0 0  
3 1.42 2.08 24.5 -2.77 -0.50 25.8 87 4 1 4 0 2 0 0  
4 1.46 1.47 26.4 -1.00 -0.15 18.5 81 4 3 2 3 4 0 0  
5 1.38 1.50 35.7 -0.95 -0.31 13.6 85 4 1 4 2 4 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer