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PDBsum entry 4f4z
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Pore analysis for: 4f4z calculated with  MOLE 2.0
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PDB id
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4f4z
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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14 pores,
coloured by radius |
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14 pores,
coloured by radius
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14 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.43 |
1.43 |
27.9 |
-1.17 |
-0.65 |
13.1 |
67 |
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2 |
1 |
0 |
0 |
1 |
0 |
0 |
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DA 2 P DA 9 P DG 10 P DC 11 P DT 11 T DC 12 T DC
13 T DC 14 T
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2 |
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1.49 |
1.49 |
32.2 |
-0.35 |
-0.12 |
14.3 |
91 |
2 |
1 |
1 |
3 |
1 |
0 |
0 |
DG 6 P DG 7 P DA 8 P DA 9 P DG 10 P DC 5 T DC 9 T
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3 |
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1.45 |
1.45 |
32.5 |
-1.68 |
-0.66 |
19.8 |
81 |
4 |
3 |
1 |
1 |
1 |
0 |
0 |
CA 402 B DG 5 C DC 12 C DG 13 C DT 10 D DT 11 D
DC 12 D
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4 |
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2.29 |
2.38 |
35.9 |
-0.77 |
-0.49 |
11.8 |
93 |
4 |
1 |
3 |
5 |
0 |
0 |
0 |
DG 5 C DC 12 C DG 13 C DG 8 D DC 9 D DT 10 D DT
11 D DC 12 D
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5 |
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2.28 |
2.37 |
35.9 |
-1.16 |
-0.63 |
14.4 |
89 |
4 |
1 |
2 |
3 |
0 |
0 |
0 |
DG 5 C DC 12 C DG 13 C DG 8 D DC 9 D DT 10 D DT
11 D DC 12 D
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6 |
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1.47 |
1.47 |
39.6 |
-0.98 |
-0.74 |
10.1 |
88 |
3 |
0 |
2 |
1 |
0 |
0 |
0 |
DA 9 P DG 10 P DC 11 P DC 12 P DG 8 T DC 9 T DT
10 T DT 11 T DC 12 T DC 13 T DC 14 T
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7 |
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1.44 |
1.43 |
43.9 |
-1.03 |
-0.44 |
15.0 |
90 |
6 |
3 |
4 |
4 |
0 |
0 |
0 |
CA 402 B DC 12 C DG 13 C DG 8 D DC 9 D
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8 |
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1.45 |
1.45 |
50.2 |
-1.69 |
-0.49 |
21.4 |
89 |
7 |
1 |
3 |
2 |
0 |
0 |
0 |
DG 6 P DG 7 P DT 10 T DT 11 T
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9 |
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1.46 |
1.45 |
51.5 |
-1.65 |
-0.68 |
19.2 |
87 |
4 |
5 |
4 |
2 |
0 |
0 |
0 |
CA 402 B DC 12 C DG 13 C DG 8 D DC 9 D
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10 |
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1.34 |
1.58 |
57.4 |
-1.28 |
-0.57 |
14.7 |
80 |
4 |
2 |
2 |
2 |
2 |
0 |
0 |
DC 12 P DC 9 T DT 10 T DT 11 T DC 12 T DC 13 T DC
14 T
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11 |
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2.14 |
2.25 |
57.9 |
-1.16 |
-0.11 |
13.5 |
79 |
5 |
2 |
8 |
5 |
3 |
2 |
0 |
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12 |
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1.60 |
1.60 |
67.9 |
-0.55 |
-0.09 |
11.6 |
76 |
6 |
1 |
3 |
8 |
4 |
2 |
0 |
DG 5 C DC 12 C DG 13 C DG 7 D DG 8 D DC 9 D DT 10
D DT 11 D DC 12 D
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13 |
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1.43 |
1.47 |
69.6 |
-0.57 |
-0.05 |
12.4 |
75 |
6 |
3 |
3 |
7 |
4 |
2 |
0 |
CA 402 B DC 12 C DG 13 C DG 7 D DG 8 D DC 9 D
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14 |
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1.33 |
1.57 |
70.9 |
-2.07 |
-0.63 |
26.1 |
79 |
7 |
4 |
0 |
1 |
1 |
0 |
0 |
DG 6 P DG 7 P DT 10 T DT 11 T DC 12 T DC 13 T DC
14 T
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program