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PDBsum entry 4f4o
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Pore analysis for: 4f4o calculated with  MOLE 2.0
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PDB id
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4f4o
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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8 pores,
coloured by radius |
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9 pores,
coloured by radius
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9 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.13 |
4.15 |
79.8 |
-0.48 |
0.01 |
16.8 |
80 |
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6 |
1 |
6 |
11 |
5 |
0 |
0 |
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HEM 201 E NAG 1 O NAG 1 P FUC 2 P
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2 |
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1.20 |
2.33 |
163.8 |
-0.73 |
-0.06 |
18.4 |
81 |
16 |
5 |
10 |
23 |
6 |
0 |
0 |
HEM 201 D OXY 202 D NAG 1 O NAG 1 P FUC 2 P
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3 |
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1.16 |
1.15 |
27.4 |
1.12 |
0.39 |
9.8 |
77 |
4 |
0 |
3 |
9 |
4 |
0 |
0 |
HEM 201 K
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4 |
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1.18 |
1.43 |
71.3 |
-0.39 |
-0.10 |
16.0 |
83 |
7 |
2 |
6 |
13 |
2 |
0 |
0 |
HEM 201 B NAG 1 N
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5 |
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1.35 |
1.35 |
75.9 |
-0.34 |
-0.03 |
15.3 |
80 |
5 |
2 |
7 |
8 |
4 |
0 |
0 |
HEM 201 B NAG 1 M NAG 1 N FUC 2 N
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6 |
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1.10 |
1.42 |
76.1 |
-1.94 |
-0.36 |
24.9 |
82 |
7 |
2 |
5 |
6 |
3 |
0 |
0 |
NAG 1 M NAG 1 N FUC 2 N
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7 |
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1.28 |
1.29 |
31.9 |
0.60 |
0.14 |
7.0 |
83 |
3 |
0 |
5 |
9 |
2 |
1 |
0 |
HEM 201 H NAG 1 R
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8 |
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1.28 |
1.29 |
83.2 |
-0.24 |
0.14 |
15.8 |
78 |
7 |
1 |
6 |
11 |
6 |
1 |
0 |
HEM 201 H
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9 |
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2.12 |
2.34 |
27.5 |
-2.22 |
-0.61 |
15.9 |
87 |
3 |
1 |
4 |
2 |
1 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program