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PDBsum entry 4f4o
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Tunnel analysis for: 4f4o calculated with  MOLE 2.0
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PDB id
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4f4o
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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1 tunnel,
coloured by tunnel radius |
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32 tunnels,
coloured by
tunnel radius
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32 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.10 |
1.43 |
26.5 |
-0.82 |
0.15 |
14.9 |
87 |
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5 |
0 |
4 |
5 |
2 |
0 |
0 |
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NAG 1 P
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2 |
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1.34 |
1.34 |
41.2 |
-1.16 |
-0.16 |
22.5 |
86 |
6 |
1 |
3 |
7 |
1 |
1 |
0 |
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3 |
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1.13 |
1.41 |
56.5 |
0.09 |
0.17 |
12.3 |
82 |
7 |
1 |
5 |
12 |
3 |
0 |
0 |
HEM 201 E
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4 |
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1.11 |
1.45 |
27.0 |
-0.69 |
0.17 |
13.8 |
87 |
5 |
0 |
4 |
5 |
2 |
0 |
0 |
NAG 1 R
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5 |
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1.37 |
2.89 |
42.9 |
-0.91 |
-0.21 |
22.8 |
91 |
6 |
2 |
4 |
10 |
1 |
0 |
0 |
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6 |
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1.11 |
1.44 |
74.9 |
-0.49 |
0.01 |
16.6 |
82 |
10 |
3 |
6 |
12 |
3 |
0 |
0 |
HEM 201 H
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7 |
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2.04 |
2.11 |
19.3 |
-1.00 |
0.07 |
23.2 |
72 |
3 |
1 |
1 |
3 |
2 |
0 |
0 |
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8 |
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1.92 |
2.08 |
23.4 |
-0.85 |
-0.11 |
17.6 |
70 |
4 |
1 |
1 |
2 |
2 |
0 |
0 |
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9 |
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2.07 |
2.33 |
29.3 |
-1.49 |
-0.10 |
21.9 |
76 |
4 |
1 |
3 |
3 |
3 |
0 |
0 |
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10 |
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2.05 |
2.11 |
31.1 |
-1.45 |
-0.12 |
19.7 |
76 |
3 |
2 |
3 |
2 |
2 |
0 |
0 |
NAG 1003 C NAG 1004 C
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11 |
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2.18 |
2.24 |
18.7 |
-1.14 |
0.02 |
22.4 |
69 |
3 |
1 |
1 |
2 |
2 |
0 |
0 |
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12 |
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1.88 |
2.07 |
24.1 |
-1.05 |
-0.13 |
20.0 |
70 |
4 |
1 |
1 |
2 |
2 |
0 |
0 |
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13 |
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2.06 |
2.34 |
29.6 |
-1.62 |
-0.10 |
23.9 |
76 |
4 |
1 |
3 |
3 |
3 |
0 |
0 |
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14 |
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2.06 |
2.11 |
18.6 |
-0.93 |
0.06 |
21.0 |
69 |
3 |
1 |
1 |
2 |
2 |
0 |
0 |
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15 |
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1.40 |
1.81 |
21.3 |
-1.29 |
0.07 |
23.9 |
71 |
3 |
1 |
1 |
2 |
1 |
0 |
0 |
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16 |
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1.21 |
2.06 |
29.0 |
1.28 |
0.65 |
10.4 |
71 |
4 |
0 |
0 |
11 |
2 |
0 |
0 |
HEM 201 G OXY 202 G
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17 |
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1.23 |
2.64 |
30.4 |
1.27 |
0.60 |
10.3 |
71 |
4 |
0 |
0 |
11 |
1 |
0 |
0 |
HEM 201 G OXY 202 G
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18 |
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1.20 |
2.17 |
31.1 |
1.62 |
0.73 |
7.2 |
69 |
3 |
0 |
0 |
10 |
3 |
0 |
0 |
HEM 201 G OXY 202 G
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19 |
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1.24 |
2.17 |
28.6 |
1.23 |
0.61 |
10.7 |
69 |
4 |
0 |
0 |
10 |
1 |
0 |
0 |
HEM 201 J OXY 202 J
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20 |
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1.20 |
2.23 |
28.8 |
1.24 |
0.66 |
10.8 |
69 |
4 |
0 |
0 |
10 |
2 |
0 |
0 |
HEM 201 J OXY 202 J
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21 |
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1.21 |
2.12 |
30.6 |
1.57 |
0.73 |
7.5 |
69 |
3 |
0 |
0 |
10 |
3 |
0 |
0 |
HEM 201 J OXY 202 J
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22 |
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1.20 |
2.20 |
29.2 |
1.21 |
0.66 |
11.5 |
71 |
4 |
0 |
0 |
11 |
2 |
0 |
0 |
HEM 201 A OXY 202 A
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23 |
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1.20 |
2.12 |
29.6 |
1.19 |
0.61 |
11.3 |
71 |
4 |
0 |
0 |
10 |
2 |
0 |
0 |
HEM 201 A OXY 202 A
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24 |
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1.19 |
2.60 |
30.9 |
1.64 |
0.70 |
6.8 |
71 |
3 |
0 |
0 |
11 |
3 |
0 |
0 |
HEM 201 A OXY 202 A
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25 |
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1.18 |
2.18 |
31.4 |
1.50 |
0.68 |
8.0 |
70 |
3 |
0 |
0 |
9 |
3 |
0 |
0 |
HEM 201 A OXY 202 A
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26 |
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1.19 |
2.59 |
38.1 |
1.24 |
0.59 |
11.2 |
73 |
4 |
0 |
0 |
12 |
1 |
0 |
0 |
HEM 201 A OXY 202 A
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27 |
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1.22 |
2.19 |
38.5 |
1.19 |
0.55 |
11.7 |
73 |
4 |
0 |
0 |
11 |
1 |
0 |
0 |
HEM 201 A OXY 202 A
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28 |
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1.67 |
1.67 |
15.0 |
-1.68 |
-0.65 |
19.6 |
80 |
3 |
1 |
0 |
0 |
0 |
0 |
0 |
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29 |
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1.71 |
1.71 |
17.7 |
-1.53 |
-0.36 |
21.0 |
70 |
4 |
1 |
0 |
1 |
1 |
0 |
0 |
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30 |
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1.51 |
2.42 |
17.9 |
-1.85 |
-0.62 |
22.0 |
82 |
3 |
0 |
0 |
0 |
0 |
0 |
0 |
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31 |
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1.53 |
1.55 |
32.6 |
-1.41 |
-0.43 |
26.5 |
87 |
4 |
2 |
1 |
5 |
0 |
0 |
0 |
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32 |
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1.21 |
2.18 |
17.9 |
1.11 |
0.71 |
8.8 |
63 |
2 |
1 |
0 |
6 |
2 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program