spacer
spacer

PDBsum entry 4e0s

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4e0s calculated with MOLE 2.0 PDB id
4e0s
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
6 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.20 3.37 24.2 1.16 0.54 8.7 76 1 2 0 7 2 2 0  
2 1.22 3.37 25.0 1.64 0.72 3.9 73 0 1 0 7 2 3 0  
3 1.22 1.64 27.5 0.17 -0.02 5.4 65 2 0 1 4 4 1 0  
4 1.21 1.45 31.5 -0.21 0.10 11.2 60 1 1 1 3 6 1 0  
5 1.17 1.93 22.6 1.17 0.50 2.1 70 1 0 1 4 4 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer