spacer
spacer

PDBsum entry 4dx2

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 4dx2 calculated with MOLE 2.0 PDB id
4dx2
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.19 1.34 134.4 -1.65 -0.54 20.7 84 13 7 5 10 1 1 0  
2 1.72 3.00 16.1 -0.81 0.19 17.3 69 2 1 1 3 3 0 0  
3 2.37 5.23 19.1 -0.84 0.28 19.2 62 1 1 1 1 4 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer