PDBsum entry 4d2x Go to PDB code:  Tunnel analysis for: 4d2x calculated with MOLE 2.0 PDB id 4d2x Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   122 tunnels, coloured by tunnel radius 116 tunnels, coloured by tunnel radius 116 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.28 2.28 17.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   2 2.28 2.28 17.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   3 2.28 2.28 17.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   4 2.28 2.28 17.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   5 2.28 2.28 17.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   6 2.28 2.28 17.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   7 2.26 2.26 18.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   8 2.26 2.26 18.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   9 2.26 2.26 18.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   10 2.26 2.26 18.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   11 2.26 2.26 18.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   12 2.26 2.26 18.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   13 2.28 2.28 19.0 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   14 2.28 2.28 19.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   15 2.28 2.28 19.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   16 2.28 2.28 19.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   17 2.28 2.28 19.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   18 2.28 2.28 19.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   19 1.49 1.49 21.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   20 1.49 1.49 21.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   21 1.49 1.49 21.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   22 1.49 1.49 21.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   23 1.49 1.49 21.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   24 1.49 1.49 21.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   25 1.52 1.52 22.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  MSE 403 F 26 1.52 1.52 22.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  MSE 403 B 27 1.52 1.52 22.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  MSE 403 A 28 1.52 1.52 22.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  MSE 403 C 29 1.52 1.52 22.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  MSE 403 E 30 1.52 1.52 22.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  MSE 403 D 31 1.46 1.46 22.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   32 1.46 1.46 22.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   33 1.46 1.46 22.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   34 1.46 1.46 22.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   35 1.46 1.46 22.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   36 1.46 1.46 22.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   37 2.26 2.26 22.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   38 2.26 2.26 22.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   39 2.26 2.26 22.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   40 2.26 2.26 22.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   41 2.26 2.26 22.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   42 2.26 2.26 22.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   43 1.52 1.52 23.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   44 1.52 1.52 23.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   45 1.52 1.52 23.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   46 1.52 1.52 23.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   47 1.52 1.52 23.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   48 1.52 1.52 23.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   49 1.52 1.52 30.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   50 1.52 1.52 30.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   51 1.52 1.52 30.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   52 1.52 1.52 30.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   53 1.52 1.52 30.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   54 1.52 1.52 30.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   55 1.51 1.51 30.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   56 1.51 1.51 30.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   57 1.51 1.51 30.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   58 1.51 1.51 30.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   59 1.51 1.51 30.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   60 1.51 1.51 30.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   61 1.52 1.52 30.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   62 1.52 1.52 30.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   63 1.51 1.51 30.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   64 1.52 1.52 30.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   65 1.52 1.52 30.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   66 1.52 1.52 30.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   67 1.51 1.51 32.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   68 1.51 1.51 32.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   69 1.51 1.51 32.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   70 1.51 1.51 32.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   71 1.51 1.51 32.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   72 1.51 1.51 32.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   73 1.51 1.51 32.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   74 1.51 1.51 33.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   75 1.52 1.52 33.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   76 1.51 1.51 33.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   77 1.52 1.52 33.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   78 1.52 1.52 33.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   79 1.52 1.52 34.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   80 1.52 1.52 34.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   81 1.52 1.52 34.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   82 1.52 1.52 34.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   83 1.52 1.52 34.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   84 1.52 1.52 34.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   85 1.51 1.51 34.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   86 1.51 1.51 34.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   87 1.51 1.51 34.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   88 1.51 1.51 34.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   89 1.51 1.51 34.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   90 1.51 1.51 34.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   91 2.27 2.27 35.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   92 2.27 2.27 35.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   93 2.27 2.27 35.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   94 2.27 2.27 35.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   95 2.27 2.27 35.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   96 2.25 2.25 37.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   97 2.25 2.25 37.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   98 2.25 2.25 37.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   99 2.25 2.25 37.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   100 2.25 2.25 37.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   101 2.25 2.25 37.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   102 1.51 1.51 37.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   103 1.51 1.51 37.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   104 1.51 1.51 37.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   105 1.51 1.51 37.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   106 1.51 1.51 37.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   107 1.51 1.51 37.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   108 1.42 1.42 40.0 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   109 1.51 1.51 40.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  MSE 551 B MSE 552 B 110 1.51 1.51 40.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  MSE 551 D MSE 552 D 111 1.51 1.51 40.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  MSE 551 E MSE 552 E 112 1.50 1.50 43.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   113 1.50 1.50 43.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   114 1.50 1.50 43.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   115 1.50 1.50 43.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   116 1.50 1.50 43.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.