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PDBsum entry 4cn3

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Top Page protein dna_rna metals Protein-protein interface(s) pores links
Pore analysis for: 4cn3 calculated with MOLE 2.0 PDB id
4cn3
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.18 2.18 38.0 -2.11 -0.63 27.6 82 4 2 1 1 0 0 0  DT 5 G DT 6 G DT 12 G DT 13 G DC 14 G DG 2 H DT 3
H DT 8 H DT 9 H DA 16 H
2 2.45 2.50 65.3 -2.45 -0.67 30.1 81 8 5 2 4 0 0 0  DT 13 G DC 14 G DT 1 H DG 2 H DA 12 H DA 13 H DC
14 H DT 15 H DG 17 H
3 2.18 2.18 94.1 -1.76 -0.50 27.6 80 9 5 2 3 0 0 0  DA 8 E DA 9 E DC 7 F DA 12 F DA 13 F DT 13 G DC
14 G DG 2 H DT 3 H
4 2.45 2.53 105.5 -1.94 -0.50 27.0 82 11 7 2 6 0 0 0  DA 12 H DA 13 H DC 14 H DT 15 H DG 17 H
5 2.46 2.54 117.3 -2.03 -0.63 25.7 79 9 6 2 6 0 0 0  DT 5 G DT 6 G DT 12 G DT 13 G DC 14 G DT 8 H DT 9
H DA 12 H DA 13 H DC 14 H DT 15 H DG 17 H
6 2.40 2.40 148.5 -1.89 -0.57 25.7 80 14 7 2 6 1 0 0  DA 8 E DA 9 E DC 7 F DA 12 F DA 13 F DA 12 H DA
13 H DC 14 H DT 15 H DG 17 H

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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