PDBsum entry 4bdm Go to PDB code:  Pore analysis for: 4bdm calculated with MOLE 2.0 PDB id 4bdm Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.21 1.48 32.3 -1.22 -0.27 20.4 77 3 3 3 4 4 0 0   2 2.49 4.57 38.1 -2.12 -0.45 24.2 76 6 3 5 2 3 0 0   3 2.43 3.39 46.4 -1.64 -0.44 22.2 76 2 5 3 2 3 0 0   4 2.44 3.29 47.5 -1.74 -0.44 18.4 83 3 4 5 1 3 0 0   5 1.26 1.56 59.3 -1.74 -0.33 21.8 79 8 4 6 2 5 0 0   6 1.40 1.40 72.2 -1.93 -0.62 25.5 79 4 9 4 3 3 0 0   7 1.25 1.48 130.8 -1.89 -0.47 25.4 76 10 9 6 5 5 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.