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PDBsum entry 4am3
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Pore analysis for: 4am3 calculated with MOLE 2.0
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PDB id
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4am3
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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20 pores,
coloured by radius |
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15 pores,
coloured by radius
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15 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.71 |
2.95 |
32.5 |
-1.92 |
-0.61 |
26.4 |
78 |
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5 |
6 |
1 |
0 |
1 |
0 |
0 |
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2 |
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3.88 |
3.88 |
37.6 |
-1.92 |
-0.59 |
25.5 |
81 |
3 |
5 |
2 |
0 |
3 |
0 |
0 |
C 4 E U 5 E U 6 E
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3 |
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2.71 |
2.92 |
48.1 |
-1.73 |
-0.36 |
27.0 |
78 |
7 |
7 |
1 |
3 |
2 |
1 |
0 |
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4 |
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2.82 |
3.09 |
60.9 |
-0.94 |
-0.28 |
21.0 |
83 |
3 |
9 |
1 |
7 |
0 |
1 |
1 |
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5 |
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1.54 |
1.67 |
64.9 |
-1.10 |
-0.52 |
16.8 |
79 |
3 |
6 |
1 |
1 |
2 |
2 |
0 |
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6 |
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1.83 |
2.04 |
76.2 |
-1.77 |
-0.61 |
22.3 |
84 |
9 |
6 |
3 |
1 |
2 |
0 |
0 |
U 1 D G 9 E U 1 I
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7 |
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3.39 |
4.04 |
79.1 |
-2.18 |
-0.25 |
29.4 |
81 |
13 |
0 |
2 |
1 |
3 |
2 |
0 |
U 1 D U 1 I
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8 |
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1.38 |
1.92 |
79.9 |
-1.43 |
-0.39 |
21.2 |
83 |
10 |
4 |
2 |
3 |
3 |
2 |
0 |
U 1 D G 8 E G 9 E
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9 |
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1.44 |
1.80 |
80.8 |
-1.66 |
-0.46 |
23.9 |
83 |
11 |
4 |
2 |
2 |
3 |
0 |
0 |
U 1 D G 8 E G 9 E U 1 I
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10 |
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1.88 |
2.07 |
82.5 |
-1.94 |
-0.60 |
23.9 |
84 |
9 |
6 |
3 |
1 |
2 |
1 |
0 |
G 9 E U 1 I
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11 |
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2.04 |
2.03 |
83.5 |
-1.89 |
-0.38 |
27.0 |
81 |
14 |
3 |
1 |
2 |
4 |
0 |
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U 1 D U 1 I
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12 |
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2.13 |
2.14 |
93.6 |
-2.14 |
-0.40 |
28.6 |
82 |
15 |
3 |
2 |
2 |
4 |
1 |
0 |
U 1 D U 1 I
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13 |
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1.80 |
2.01 |
104.8 |
-1.63 |
-0.54 |
23.0 |
82 |
12 |
10 |
2 |
3 |
4 |
0 |
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G 9 E U 1 I
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14 |
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1.88 |
2.08 |
120.6 |
-1.66 |
-0.25 |
25.8 |
80 |
18 |
9 |
2 |
6 |
7 |
1 |
0 |
U 6 E U 1 I
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15 |
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1.22 |
3.34 |
157.3 |
-1.32 |
-0.30 |
22.8 |
78 |
22 |
9 |
2 |
11 |
6 |
1 |
0 |
PO4 1621 B U 1 D U 1 I
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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