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PDBsum entry 4am3

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Top Page protein dna_rna ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 4am3 calculated with MOLE 2.0 PDB id
4am3
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.16 1.25 116.1 -1.31 -0.12 23.4 79 16 6 6 10 5 2 0  U 1 D U 1 I
2 1.14 1.14 18.3 -0.08 -0.31 8.8 78 2 0 0 4 1 0 0  
3 1.23 1.44 15.1 2.59 0.92 5.4 97 1 1 0 6 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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