PDBsum entry 3vkh Go to PDB code:  Pore analysis for: 3vkh calculated with MOLE 2.0 PDB id 3vkh Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   35 pores, coloured by radius 33 pores, coloured by radius 33 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.38 1.54 26.1 1.58 0.40 4.5 70 3 2 1 9 1 1 0   2 1.39 1.39 68.1 -0.94 -0.27 12.9 89 6 3 8 9 4 8 0  ADP 9009 B 3 1.64 1.84 87.7 -1.25 -0.62 12.5 89 6 5 15 4 1 5 0   4 1.94 3.07 111.2 -1.91 -0.44 23.1 73 10 13 3 6 8 3 0  ADP 9002 A 5 1.77 1.99 123.3 -1.17 -0.54 9.8 90 8 6 18 13 2 4 2   6 1.96 2.11 123.7 -1.39 -0.35 16.7 86 13 8 17 10 3 5 2   7 1.17 1.75 133.7 -1.38 -0.51 16.6 85 10 17 9 14 2 10 0   8 1.34 1.62 132.6 -1.30 -0.32 17.4 83 5 11 18 16 4 5 1   9 1.61 1.95 134.9 -0.71 -0.28 14.2 85 9 14 15 10 3 4 0   10 1.38 2.84 149.5 -1.29 -0.40 15.2 86 10 11 16 13 3 10 0  ADP 9009 B 11 1.81 1.83 157.1 -1.58 -0.41 18.4 82 10 17 21 11 6 6 0   12 1.22 1.34 156.9 -1.42 -0.43 14.6 88 8 9 18 13 3 3 0  ADP 9002 A 13 1.25 2.51 159.6 -1.63 -0.40 17.3 83 15 12 19 14 7 7 0   14 1.60 3.68 169.6 -0.90 -0.33 14.8 85 16 16 22 21 5 11 1  ADP 9007 B 15 1.37 1.45 175.5 -0.72 -0.18 14.9 85 13 16 22 19 4 9 0   16 1.56 1.55 181.6 -1.43 -0.58 16.4 88 8 18 17 8 2 11 0   17 1.96 2.00 203.2 -1.47 -0.36 18.5 82 18 19 19 16 9 12 2   18 1.93 2.03 206.9 -1.28 -0.46 14.5 82 12 18 22 19 8 11 2   19 1.20 1.29 220.8 -1.49 -0.49 19.5 83 18 22 17 20 7 6 0   20 1.35 1.58 231.7 -1.07 -0.15 16.1 81 26 14 17 21 13 7 0   21 1.39 1.43 229.6 -1.41 -0.43 17.0 86 18 16 26 26 4 8 2   22 1.20 1.46 235.4 -0.86 -0.21 11.9 82 20 14 20 25 12 6 0   23 1.33 1.44 246.7 -1.78 -0.60 18.4 87 14 23 26 13 2 12 0   24 1.36 1.28 271.2 -1.40 -0.30 18.2 81 22 21 29 26 8 15 0   25 1.31 1.29 274.9 -1.47 -0.42 16.9 88 16 20 31 21 6 16 0  ADP 9009 B 26 1.30 2.05 302.1 -1.77 -0.58 17.4 86 21 28 37 17 5 18 0   27 1.27 1.63 320.2 -1.31 -0.29 18.2 79 30 26 16 33 15 10 1  ADP 9002 A 28 1.27 2.99 335.1 -1.70 -0.56 16.0 87 22 29 40 26 6 17 2   29 1.44 2.29 372.8 -1.51 -0.35 18.5 82 29 32 38 33 15 17 0   30 2.84 5.14 28.7 -0.11 -0.06 14.8 88 2 4 4 8 0 0 0   31 2.88 2.88 29.8 -0.05 0.09 15.8 88 3 3 4 9 0 0 0   32 1.10 1.59 44.8 -0.74 -0.29 16.7 89 6 6 6 10 0 0 0   33 1.11 1.23 53.4 0.81 0.12 8.3 85 1 3 4 15 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.