PDBsum entry 3v81 Go to PDB code:  Tunnel analysis for: 3v81 calculated with MOLE 2.0 PDB id 3v81 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 2.41 107.5 -0.49 0.03 13.5 78 7 5 4 11 6 2 0  ATM 822 P DA 706 T DG 707 T DG 708 T 2 1.19 2.70 143.7 -0.63 -0.16 13.2 80 11 6 7 11 5 2 0  DC 803 P DT 813 P DC 814 P DG 708 T DA 718 T DG 719 T DG 720 T DG 721 T DA 722 T DC 723 T DT 724 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.