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PDBsum entry 3v6h
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Pore analysis for: 3v6h calculated with  MOLE 2.0
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PDB id
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3v6h
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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10 pores,
coloured by radius |
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13 pores,
coloured by radius
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13 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.47 |
1.47 |
30.6 |
0.08 |
0.27 |
18.6 |
94 |
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4 |
0 |
2 |
2 |
0 |
0 |
0 |
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DA 8 C DT 9 C DC 10 C DC 11 C DT 13 C DC 14 C DC
17 C DG 5 D DA 6 D DG 8 D DG 9 D DA 10 D DT 11 D
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2 |
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1.37 |
2.90 |
42.4 |
-1.96 |
-0.41 |
27.3 |
79 |
6 |
4 |
4 |
5 |
2 |
0 |
0 |
DA 7 T
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3 |
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1.86 |
2.04 |
42.8 |
-1.46 |
-0.34 |
15.6 |
89 |
4 |
0 |
4 |
5 |
1 |
0 |
0 |
DCP 401 B CA 403 B DA 7 P DG 8 P DG 9 P DA 10 P
DT 12 P DOC 13 P DC 4 T EFG 5 T DG 6 T DA 7 T DA
8 T DT 13 T DC 14 T DC 15 T
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4 |
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1.93 |
2.05 |
46.4 |
-2.08 |
-0.57 |
23.3 |
81 |
8 |
4 |
3 |
4 |
1 |
1 |
0 |
DT 1 C DA 7 T
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5 |
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1.50 |
1.50 |
47.6 |
-0.74 |
-0.23 |
11.6 |
91 |
2 |
1 |
3 |
4 |
1 |
0 |
0 |
DCP 401 A DC 4 C EFG 5 C DG 6 C DA 7 C DA 8 C DT
13 C DC 14 C DG 9 D DA 10 D DT 11 D DT 12 D DOC
13 D CA 101 D
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6 |
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1.91 |
1.91 |
54.6 |
-1.61 |
-0.46 |
21.3 |
74 |
7 |
3 |
2 |
3 |
3 |
1 |
0 |
DA 7 T
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7 |
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2.65 |
3.73 |
54.2 |
-1.97 |
-0.23 |
28.4 |
74 |
6 |
5 |
1 |
1 |
3 |
1 |
0 |
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8 |
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2.02 |
2.07 |
59.2 |
-0.09 |
-0.41 |
7.4 |
81 |
1 |
1 |
0 |
4 |
0 |
1 |
0 |
DT 1 C DA 7 P DG 8 P DG 9 P DA 10 P DC 4 T EFG 5
T DG 6 T DT 13 T DC 14 T DC 15 T
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9 |
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1.77 |
1.75 |
63.6 |
-1.64 |
-0.40 |
21.0 |
73 |
7 |
3 |
1 |
1 |
5 |
0 |
0 |
DG 6 C DA 7 C DA 8 C DT 9 C DC 10 C DC 11 C DC 17
C DG 5 D DA 6 D DT 12 D DOC 13 D CA 101 D
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10 |
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1.37 |
2.92 |
63.8 |
-1.24 |
-0.24 |
19.8 |
81 |
5 |
4 |
4 |
8 |
2 |
0 |
0 |
DCP 401 B DA 7 P DG 8 P DG 9 P DA 10 P DT 12 P D
OC 13 P DC 4 T EFG 5 T DG 6 T DA 7 T DT 13 T DC
14 T DC 15 T
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11 |
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1.77 |
1.75 |
66.2 |
-1.33 |
-0.30 |
19.1 |
78 |
5 |
2 |
1 |
3 |
3 |
0 |
0 |
DCP 401 A DC 4 C EFG 5 C DG 6 C DA 7 C DT 13 C DC
14 C DG 9 D DA 10 D DT 11 D DT 12 D DOC 13 D
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12 |
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1.85 |
1.93 |
68.1 |
-2.06 |
-0.46 |
24.4 |
81 |
10 |
6 |
6 |
6 |
4 |
0 |
0 |
DA 7 T
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13 |
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2.96 |
3.02 |
82.0 |
-0.57 |
-0.38 |
9.7 |
83 |
3 |
2 |
2 |
3 |
1 |
0 |
0 |
DCP 401 B CA 403 B DA 6 P DA 7 P DG 8 P DG 9 P DA
10 P DT 12 P DOC 13 P DC 4 T EFG 5 T DG 6 T DA 7
T DA 8 T DT 13 T DC 14 T DC 15 T DC 16 T
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program