PDBsum entry 3v6h Go to PDB code:  Tunnel analysis for: 3v6h calculated with MOLE 2.0 PDB id 3v6h Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.35 1.48 21.2 -0.41 -0.16 15.1 94 3 0 2 4 0 0 0  DT 1 C DC 4 C EFG 5 C DG 6 C DT 11 D 2 1.31 1.50 22.5 -0.55 -0.72 5.8 100 2 0 3 1 0 0 0  DT 1 C DA 3 C DC 4 C EFG 5 C DG 6 C DT 12 D 3 1.35 1.48 39.9 -1.42 -0.59 20.3 91 3 2 3 1 0 0 0  DT 1 C DC 2 C DA 3 C DC 4 C EFG 5 C DG 6 C 4 1.32 1.49 47.6 -0.85 -0.38 16.2 83 5 2 2 4 3 0 0  DT 1 C DC 4 C EFG 5 C DG 6 C DA 7 C 5 1.32 1.51 47.7 -1.46 -0.47 16.1 92 6 1 5 4 1 0 0  DCP 401 A DT 1 C DC 4 C EFG 5 C DG 6 C DA 7 C DA 8 C DT 12 D DOC 13 D CA 101 D 6 1.32 1.50 50.0 -1.33 -0.43 21.5 84 6 5 2 5 2 0 0  DT 1 C DC 4 C EFG 5 C DG 6 C DA 7 C 7 1.33 1.52 56.3 -1.03 -0.45 11.4 84 6 1 3 3 3 0 0  DCP 401 A DT 1 C DC 4 C EFG 5 C DG 6 C DA 7 C DA 8 C DT 9 C DC 10 C DC 11 C DT 12 D DOC 13 D CA 101 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.