PDBsum entry 3v6f Go to PDB code:  Pore analysis for: 3v6f calculated with MOLE 2.0 PDB id 3v6f Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   20 pores, coloured by radius 20 pores, coloured by radius 20 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.25 1.25 28.5 -0.66 -0.47 12.5 89 4 2 1 2 0 1 0   2 2.95 3.65 48.3 -2.02 -0.92 11.0 98 0 3 13 1 0 1 0   3 1.97 1.97 49.2 -1.39 -0.81 15.2 94 2 3 4 1 0 1 0   4 2.98 2.97 54.3 -2.74 -0.82 27.0 90 6 4 9 0 0 0 0   5 3.03 3.29 54.4 -2.01 -0.79 14.9 93 3 3 9 1 0 1 0   6 2.03 3.44 55.0 -1.26 -0.53 8.2 97 3 2 9 1 2 0 0   7 1.26 1.26 66.4 -1.17 -0.61 13.3 95 6 4 9 2 0 0 0   8 1.83 2.12 67.8 -1.67 -0.69 17.5 91 8 6 9 2 0 1 0   9 1.27 1.27 69.4 -1.05 -0.47 17.5 94 6 3 4 5 0 0 0   10 1.83 2.12 71.1 -1.61 -0.58 22.3 89 8 5 4 5 0 1 0   11 1.70 3.79 79.9 -1.94 -0.48 16.4 89 7 4 14 1 5 0 0   12 1.25 1.25 88.6 -1.35 -0.67 12.9 97 5 4 13 2 0 0 0   13 2.17 2.56 95.6 -2.02 -0.63 16.8 90 7 3 14 1 4 0 0   14 2.23 3.65 97.7 -1.57 -0.80 11.7 91 2 4 13 2 1 3 0   15 3.05 3.29 102.4 -1.10 -0.49 9.9 87 3 4 9 3 1 2 0   16 2.09 3.59 103.9 -1.69 -0.74 14.2 87 5 4 9 2 1 3 0   17 1.82 1.90 106.8 -1.33 -0.53 14.4 85 6 5 8 3 1 1 0   18 3.61 3.60 118.3 -1.42 -0.54 14.7 87 6 5 9 3 1 1 0   19 2.27 2.44 143.6 -1.15 -0.53 10.8 88 5 5 12 5 1 3 0   20 1.80 3.40 147.6 -1.75 -0.57 14.5 91 7 5 18 3 5 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.