PDBsum entry 3v6f Go to PDB code:  Tunnel analysis for: 3v6f calculated with MOLE 2.0 PDB id 3v6f Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.21 2.57 21.1 0.57 -0.19 2.5 85 1 0 3 4 1 0 0   2 1.29 2.49 27.8 0.21 -0.28 3.4 89 1 0 4 4 1 0 0   3 1.16 1.36 18.2 -0.44 -0.61 6.6 78 0 2 3 3 1 1 0   4 1.16 1.26 18.6 -0.17 -0.51 2.5 75 0 0 4 3 2 1 0   5 1.15 1.27 21.3 -0.36 -0.55 2.5 81 0 0 4 2 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.