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PDBsum entry 3unf

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Pore analysis for: 3unf calculated with MOLE 2.0 PDB id
3unf
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.44 1.58 79.5 -1.87 -0.27 21.2 77 12 6 2 2 4 1 0  K 301 G
2 1.23 3.10 121.9 -2.57 -0.48 29.4 80 13 9 4 4 3 2 0  
3 1.45 1.62 135.2 -1.67 -0.35 20.3 80 11 10 6 5 4 2 0  K 301 G
4 1.15 1.09 154.1 -1.36 -0.31 24.0 83 16 10 8 11 4 1 0  04C 201 N IOD 202 N
5 1.09 0.95 158.8 -1.52 -0.26 16.9 84 16 4 15 11 9 2 1  K 305 M 04C 201 N IOD 202 N 04C 201 b
6 1.08 0.96 163.6 -1.37 -0.37 16.7 88 13 4 15 10 4 2 0  04C 301 K IOD 302 K 04C 201 N IOD 202 N 04C 301 Y
7 1.23 1.79 164.0 -1.92 -0.46 21.1 76 11 11 6 2 5 6 0  CL 301 A
8 1.18 1.18 162.9 -1.63 -0.35 17.0 82 17 7 18 10 9 2 0  K 305 M 04C 201 N IOD 202 N CL 301 P 04C 201 b
9 1.62 1.63 166.3 -2.18 -0.51 26.8 79 22 17 11 9 5 3 0  
10 1.56 1.60 167.4 -2.17 -0.39 24.8 77 25 13 10 8 8 2 0  CL 303 A K 301 G
11 1.66 2.04 189.6 -1.59 -0.26 22.5 82 19 12 14 16 8 1 1  CL 302 S CL 303 a
12 1.66 1.66 191.3 -1.73 -0.36 22.3 80 20 15 16 16 8 1 0  CL 301 P CL 302 S CL 303 a
13 1.35 3.14 200.3 -2.12 -0.33 26.6 81 26 12 9 11 7 2 1  CL 303 A
14 1.18 1.18 205.1 -1.33 -0.39 20.2 83 12 10 10 9 6 1 0  04C 201 N IOD 202 N 04C 301 Y
15 1.22 1.27 215.1 -1.48 -0.25 20.7 82 20 9 13 14 8 2 1  04C 201 N IOD 202 N
16 1.24 1.13 222.2 -1.81 -0.46 21.5 82 22 13 17 10 7 4 0  04C 201 N IOD 202 N
17 1.13 1.13 238.9 -1.30 -0.30 19.1 83 21 13 18 20 9 1 0  K 305 M 04C 201 N IOD 202 N CL 302 S CL 303 a 04C
201 b
18 1.76 2.57 244.6 -1.87 -0.34 23.3 80 26 14 14 11 10 4 2  CL 301 A 04C 301 H IOD 302 H CL 301 P K 304 X 04C
301 Y
19 1.56 1.75 239.4 -2.18 -0.51 23.0 83 22 13 19 10 6 4 0  04C 301 K IOD 302 K
20 1.86 2.45 240.5 -1.71 -0.26 22.7 81 25 11 11 12 10 4 3  CL 301 A 04C 301 H IOD 302 H K 304 X 04C 301 Y
21 1.59 1.84 258.3 -1.63 -0.36 22.2 84 21 13 16 19 6 1 0  04C 301 K IOD 302 K CL 302 S K 304 X CL 303 a
22 1.85 2.24 252.0 -2.46 -0.42 26.9 80 30 15 18 11 11 4 1  K 304 X 04C 301 Y
23 1.57 1.69 270.0 -1.52 -0.39 22.2 80 19 16 7 10 8 3 2  CL 301 A 04C 301 H IOD 302 H 04C 301 Y
24 1.68 3.13 256.1 -2.56 -0.47 27.1 80 31 18 21 10 11 4 0  CL 301 P K 304 X 04C 301 Y
25 1.63 1.62 276.6 -1.88 -0.32 28.9 81 29 22 12 21 8 0 0  CL 302 S K 304 X 04C 301 Y CL 303 a
26 1.49 1.45 282.0 -2.31 -0.53 26.5 80 24 20 14 9 9 3 0  04C 301 Y
27 1.65 1.97 283.1 -1.48 -0.28 23.4 81 26 18 13 20 10 3 2  CL 301 A 04C 301 H IOD 302 H CL 302 S K 304 X 04C
301 Y CL 303 a
28 1.32 1.24 303.0 -1.79 -0.38 26.0 81 22 21 13 18 9 0 0  CL 302 S K 304 X 04C 301 Y CL 303 a
29 1.62 1.60 300.1 -1.91 -0.25 27.1 80 36 20 12 21 11 1 0  CL 303 A K 301 G CL 302 S K 304 X 04C 301 Y CL
303 a
30 1.59 1.91 315.9 -2.21 -0.41 27.7 80 34 24 20 18 11 3 0  CL 302 S K 304 X 04C 301 Y CL 303 a

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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