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PDBsum entry 3ram
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Pore analysis for: 3ram calculated with  MOLE 2.0
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PDB id
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3ram
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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8 pores,
coloured by radius |
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9 pores,
coloured by radius
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9 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.84 |
2.01 |
27.5 |
-2.47 |
-0.60 |
29.6 |
84 |
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6 |
2 |
1 |
2 |
0 |
0 |
0 |
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GOL 515 B GOL 518 C
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2 |
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1.44 |
1.50 |
31.2 |
-0.78 |
-0.21 |
9.9 |
83 |
3 |
3 |
3 |
6 |
1 |
1 |
0 |
GOL 504 D GOL 521 D
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3 |
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1.44 |
1.50 |
34.3 |
-0.85 |
-0.43 |
15.2 |
85 |
2 |
4 |
2 |
4 |
2 |
0 |
0 |
GOL 504 D GOL 511 D GOL 521 D
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4 |
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1.13 |
1.46 |
36.1 |
-1.11 |
-0.32 |
9.7 |
83 |
4 |
3 |
3 |
5 |
1 |
2 |
0 |
GOL 531 C
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5 |
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1.84 |
1.97 |
68.2 |
-1.97 |
-0.47 |
23.7 |
82 |
9 |
4 |
5 |
4 |
2 |
1 |
0 |
GOL 531 C
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6 |
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1.17 |
1.44 |
76.2 |
-1.77 |
-0.51 |
21.9 |
84 |
10 |
4 |
6 |
5 |
2 |
1 |
0 |
GOL 531 C
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7 |
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1.40 |
1.47 |
26.6 |
-0.61 |
-0.12 |
8.1 |
85 |
3 |
2 |
3 |
5 |
1 |
1 |
0 |
GOL 530 B
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8 |
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1.41 |
1.42 |
27.9 |
-0.72 |
-0.15 |
15.2 |
92 |
2 |
3 |
4 |
4 |
1 |
0 |
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GOL 530 B
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9 |
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1.42 |
1.43 |
32.5 |
-0.13 |
0.07 |
11.7 |
88 |
3 |
2 |
4 |
6 |
1 |
0 |
0 |
GOL 530 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program