PDBsum entry 3q9c Go to PDB code:  Pore analysis for: 3q9c calculated with MOLE 2.0 PDB id 3q9c Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 pores, coloured by radius 29 pores, coloured by radius 29 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.36 1.44 104.0 -1.38 -0.09 18.8 79 10 6 6 7 7 3 0  Q9C 405 E 2 1.17 2.10 105.2 -1.26 -0.12 16.7 78 12 7 5 7 8 4 0  Q9C 409 I 3 1.17 2.09 108.0 -1.71 -0.14 22.3 78 13 7 5 6 7 3 0  Q9C 410 J 4 1.20 2.18 113.4 -0.94 -0.08 12.5 80 7 7 8 10 8 4 0  Q9C 401 A Q9C 405 E 5 1.24 2.16 113.8 -1.13 -0.04 15.4 79 11 8 6 8 8 3 0  Q9C 401 A 6 1.20 2.13 115.6 -0.88 0.00 12.7 77 8 6 6 9 9 4 0  Q9C 409 I Q9C 410 J 7 1.28 2.39 124.5 -0.99 -0.06 13.4 78 11 6 7 10 9 5 0  Q9C 401 A Q9C 409 I 8 1.31 2.20 125.5 -1.14 -0.04 16.3 78 11 7 6 9 8 4 0  Q9C 401 A Q9C 410 J 9 1.29 2.16 129.5 -1.05 -0.01 15.4 78 10 5 7 9 9 4 0  Q9C 405 E Q9C 410 J 10 1.20 2.18 137.6 -1.14 -0.04 15.9 77 11 6 7 10 10 5 0  Q9C 405 E Q9C 409 I 11 2.10 2.24 31.3 -1.77 -0.50 19.4 84 5 2 2 4 2 1 0   12 2.14 2.16 91.7 -2.27 -0.51 27.0 81 14 7 2 3 3 1 0   13 1.21 2.12 103.6 -1.45 -0.18 20.2 80 12 9 6 7 7 2 0  Q9C 403 C 14 1.34 2.18 105.1 -1.26 -0.29 16.1 81 10 4 4 6 5 2 0  Q9C 403 C 15 1.21 1.22 118.3 -0.88 -0.03 12.6 78 8 9 8 9 10 4 0  Q9C 403 C Q9C 407 G 16 1.18 1.23 119.5 -1.55 -0.18 21.7 78 13 9 4 9 8 4 0  Q9C 407 G 17 1.22 1.21 126.2 -0.85 -0.01 12.8 78 8 8 7 10 10 4 0  Q9C 407 G Q9C 412 L 18 1.29 2.03 125.5 -1.44 -0.16 20.6 78 15 9 4 9 8 4 0  Q9C 412 L 19 1.24 2.14 134.0 -1.04 -0.01 14.6 77 11 7 7 9 10 4 0  Q9C 403 C Q9C 412 L 20 1.58 1.60 132.3 -2.09 -0.51 25.1 84 13 8 3 4 2 1 0   21 1.57 1.60 132.9 -1.82 -0.62 22.4 89 11 5 1 5 0 0 0   22 1.37 2.15 138.8 -1.00 -0.34 12.8 84 7 7 5 7 5 2 0  Q9C 403 C 23 1.30 2.21 161.9 -1.38 -0.27 18.4 82 12 8 4 8 5 2 0  Q9C 412 L 24 1.38 2.16 173.1 -1.27 -0.45 16.0 83 9 12 5 9 4 3 0  Q9C 403 C 25 1.37 2.21 176.2 -1.10 -0.37 14.1 84 10 6 6 9 4 3 0  Q9C 407 G 26 1.77 1.77 174.7 -2.10 -0.57 25.4 82 16 13 3 6 3 2 0   27 1.82 1.81 175.3 -1.97 -0.65 24.7 86 14 10 1 7 0 1 0   28 1.21 1.21 182.6 -1.23 -0.41 16.3 83 10 12 5 10 5 3 0  Q9C 407 G 29 1.69 1.67 189.1 -1.91 -0.48 24.4 83 17 7 3 8 3 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.