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PDBsum entry 3q9c
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Tunnel analysis for: 3q9c calculated with  MOLE 2.0
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PDB id
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3q9c
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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14 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.48 |
1.64 |
24.4 |
-0.74 |
-0.10 |
9.8 |
74 |
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2 |
1 |
2 |
2 |
2 |
2 |
0 |
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2 |
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1.21 |
2.28 |
33.2 |
-0.54 |
0.26 |
10.1 |
78 |
3 |
1 |
2 |
2 |
5 |
1 |
0 |
Q9C 404 D
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3 |
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1.13 |
2.07 |
22.4 |
-1.18 |
-0.25 |
17.1 |
88 |
2 |
1 |
0 |
3 |
1 |
1 |
0 |
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4 |
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1.12 |
2.09 |
57.5 |
-0.80 |
-0.42 |
10.0 |
87 |
5 |
3 |
1 |
7 |
2 |
1 |
0 |
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5 |
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1.42 |
2.54 |
15.4 |
-0.03 |
0.40 |
9.1 |
73 |
0 |
2 |
0 |
4 |
3 |
0 |
0 |
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6 |
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1.31 |
2.62 |
15.3 |
0.00 |
0.35 |
7.2 |
73 |
0 |
2 |
0 |
4 |
3 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program